Introduction to Biotechnology I Syllabus for 2019-2020
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Instructor Information

Office Location

210A

Office Hours

Monday and Wednesday: 8:00 am - 9:00 am

or by appointment

Course Information

COVID-19 Protocols

Recording Policy

Disability Statement

If you have a disability (learning, mental, physical) that affects your ability to participate effectively and have access to any program or service at Amarillo College please contact Disability Services at (806) 345-5639 . Our offices are located in the Student Service Center office 112. More information may be found at www.actx.edu/disability.
Disability Services facilitates access to all programs and services according to the ADA, Americans with Disabilities Act and Section 504 of the Rehabilitation Act, as well as other federal and state laws.

Amarillo College Web Accessibility Policy Statement

Amarillo College is committed to providing equal access to all programs and services, including all working, learning, and service environments that affect equal access for persons with disabilities. This commitment to provide equal access and opportunity for persons with disabilities is in compliance with federal and state law. Amarillo College also strives to provide Electronic and Information Resources (EIR) that are accessible to all authorized users.

If you find you are unable to access material in an accessible format please contact the Disability Services Office at (806) 345-5639 . This office will work in conjunction with other campus resources to address and accommodate your issue in a timely manner.

Statement for Mental Health and Advocacy & Resource Center:

As a student you may experience a range of issues that can cause barriers to learning, such as strained relationships, increased anxiety, alcohol/drug problems, feeling down, difficulty concentrating and/or lack of motivation. These mental health concerns or stressful events may lead to diminished academic performance or reduce a student's ability to participate in daily activities. Amarillo College offers services to assist you with addressing these and other concerns you may be experiencing. If you or someone you know are suffering from any of the aforementioned conditions, you can learn more about the broad range of confidential mental health services available on campus by calling the AC Counseling Center at 806-371-5900. The AC Counseling Center website is https://www.actx.edu/counseling/ . Also, if you are in need of social services (affordable housing, utilities, transportation, food, clothing, childcare, medical/dental/vision, legal), please call the AC Advocacy & Resource Center at 806-371-5439. The AC Advocacy & Resource Center website is https://www.actx.edu/arc

Amarillo College Tutoring for Success Policy:

The Tutoring for Success policy applies to any student whose grade or performance in the course falls below a departmentally determined minimum threshold. In either of those cases, the instructor will direct the student to the appropriate tutoring service, which may be faculty-led, discipline-specific, and/or general. Under this policy, the instructor will follow specific departmental guidelines governing the use, duration, and grade component of the tutoring need.

Administrative Drop Policy

Students who do not attend class on or prior to the census date will be administratively dropped. Effective Fall, 2016

Student Withdrawal Procedures

Students who wish to withdraw from a course must complete all steps indicated on the Academic Withdrawal Request form by the course withdrawal deadline.

NOTE: Students who are attending Texas institutions of higher education, for the first time fall 2007 and later, may not withdraw from more than six courses during their academic career. This withdrawal limitation does not include dual credit or developmental classes (Senate Bill 1231 Rule 4.10.) For more information on Drop and Withdrawal Policies, please visit the Registrar's Office Web site.

Privacy Statement

The Amarillo College Privacy Policy is found at https://www.actx.edu/-amarillo-college-privacy-notice , and applies to all Amarillo College students.  If you have questions about this privacy statement or you believe that your personal information has been released without your consent, send email to humanresources@actx.edu .

Course

BIOL-1414-001 Introduction to Biotechnology I

Prerequisites

Overview of classical genetics, DNA structure, the flow of genetic information, DNA replication, gene transcription, and protein translation. Principles of major molecular biology and genetic engineering techniques, including restriction enzymes and their

Course Description

Student ResourcesStudent Resources Website

Department Expectations

Occupational License Disclaimer

Notice to Students enrolled in an educational program for preparation of issuance of certain occupational licenses:

Students enrolled in an educational program in preparation for obtaining certain occupational licenses are potentially ineligible for such license if the student has been convicted of an offense. For further information, please contact:

Melodie Graves
Justice Involved Advocate
Student Service Center 117
mgraves24@actx.edu
806-371-5995
Make appointment at https://melodiegraves.youcanbook.me

You can also contact the Legal Clinic, or the faculty member in charge of the educational program that you seek to enroll in. The further information you will receive will include notification to you of your right to request a criminal history evaluation letter from the licensing authority in order to clarify your particular situation.

Hours

(4 sem hrs; 3 lec, 1 lab)

Class Type

On Campus Course

Syllabus Information

Textbooks

Lecture Book

Urry, L. A., Cain, M. L., Wasserman, S. A., Minorsky, P. V., Wasserman, S. A., Reece, J. B., and Campbell, N. A. 2017. Campbell Biology. 11th ed. Pearson Publishing, New Yourk.

 

Laboratory Book

Daugherty, Ellyn. Biotechnology: Laboratory Manual. second ed., EMC Publishing/Paradigm Education Solutions, 2017.

**NOTE: some labs will be provided on Blackboard

Supplies

Note taking supplies such as a spiral/journal/loose leaf paper with a three ring binder and a writing implement (pen or pencil).

In order to receive your AC Connect Email, you must log in through AC Connect at https://acconnect.actx.edu 

AC Online is utilized in this class as a grade book and e-mail system. 

Student Performance

STUDENT PERFORMANCE, COMPETENCIES AND OBJECTIVES: 

This course is designed in a way to cover the biology concepts along with the biotechnology testings and techniques. It will teach many the skills and procedures employed in biotechnology as well as the fundamental theories and mechanisms that are the basis for the procedures.  The terminology and vocabulary used by the biotechnologist will be developed and applied.  Thus, upon successful completion of this course, students will be able to: 

  1. Distinguish between prokaryotic, eukaryotic, plant and animal cells, and identify major cell structures.
  2. Identify stages of the cell cycle, mitosis (plant and animal), and meiosis.
  3. Interpret results from cell physiology experiments involving movement across membranes, enzymes, photosynthesis, and cellular respiration.
  4. Apply genetic principles to predict the outcome of genetic crosses and statistically analyze results.
  5. Identify parts of a DNA molecule, and describe replication, transcription, and translation.
  6. Develop critical thinking skills through exploration and application of the scientific method in the laboratory and classroom
  7. identify units of measurement and convert them to other units
  8. calculate the amounts of substances needed to make a solution
  9. calculate and prepare dilutions
  10. demonstrate abilities to use the tools of biotechnology including micropipettes, pH meters, balances, centrifuges, UV-vis spectrophotometers, and autoclaves.
  11. Extract DNA from a sample
  12. Qualitatively check DNA samples by running an end point PCR and analyze the results
  13. Quantitatively check DNA sample by running a real-time PCR and analyze data
  14. Preparing, staining, and examining tissues’ slides under microscope
  15. Students will also be able to identify the controls in an experiment, develop an assay, perform it in a lab and calculate and analyze the results and draw the appropriate conclusions.

Students Rights and Responsibilities

Student Rights and Responsibilities

Log in using the AC Connect Portal

In order to receive your AC Connect Email, you must log in through AC Connect at https://acconnect.actx.edu .

If you are an active staff or faculty member according to Human Resources, use "Exchange". All other students, use "AC Connect (Google) Email".

Expected Student Behavior

GRIEVANCE PROCEDURE: If a student is having a problem with the course policies or the instructor, he or she should first try and resolve any such problems with the instructor. If the grievance is not resolved, he or she can contact the Department of Biological Sciences Chairperson, the Dean of Sciences and Engineering, Vice President of Academic Affairs, and the College President, IN THAT ORDER.

WITHDRAWAL: A grade of "W" will be given for drops or withdraws on or before the published official withdraw date, February 5, 2020.

SAFETY: "Material Safety Data Sheets (MSDS) are stored in SCIE 110. A link to the online MSDS Sheets is in the Introduction Folder in the online class
For any emergency contact Campus Police 371-5911

BAD WEATHER
If classes are canceled due to inclement weather, you are responsible for reading and learning the material that would have been covered.  If an exam was scheduled and classes are canceled, the exam time will not be extended unless classes are canceled on the last day of an Exam.  If this happens the Instructor will set a new end date for that exam. (BE PREPARED) If class is canceled the last day of the semester and an exam was scheduled, then the exam will be added to the Final Exam and the questions will count as the exam and as the final exam. If class is canceled during finals week, check the AC website for new exam times. Cancellations will be announced on the Radio by 6:30 AM or by 3:00 PM for evening classes. Also check the AC website.

 

STUDENT CODE OF CONDUCT

All students shall obey the law, show respect for properly constituted authority, and observe correct standards of conduct. In addition to activities prohibited by law, the following types of behavior are prohibited:

“Cheating on a test” shall include:

  1. Copying from another student’s test paper.
  2. Using test materials not authorized by the person administering the test.
  3. Collaborating with or seeking aid from another student during a test without permission from the test administrator.
  4. Knowingly using, buying, selling, stealing, or soliciting, in whole or in part, the contents of a pending test.
  5. The unauthorized transporting or removal, in whole or in part, of the contents of the pending test.
  6. Substituting for another student, or permitting another student to substitute for one’s self, to take a test.
  7. Bribing another person to obtain a pending test or information about a pending test

CELL PHONES: It is the policy of the Biology Department that cell phones must be turned off or in the silent mode in the classroom. Students are NOT allowed to use the cell phone during the class time. If a student gets a phone call during class he/she will NOT answer it during class time unless prior approval by the instructor. Please be considerate to others.

 

 

QUIZ and FINAL EXAM RULES: Do nothing which would appear to involve cheating.  Failure to abide by the quiz rule will result in a grade of zero.  Once a quiz has been started you may not leave the classroom for any reason.  Use the facilities prior to starting the quiz.  When you turn your quiz in, it is final.  You can not get it back to make changes.  If you believe that a paper has been graded incorrectly, please return it with a written explanation which must include: 1) your name, 2) the number of the question(s) you wish to have reconsidered, and 3) a detailed explanation of the mistake and documentation for the correct answer (include page numbers and source).
You must also finish before the due date and time or a grade of zero will be assigned. Extra time will not be given to an individual student.  Please do not ask.

 

Grading Criteria

 

GRADING SCALE
89.5 - 100 = A
79.5 - 89.4 = B
69.5 - 79.4 = C
59.5 - 69.4 = D
00.0 - 59.4 = F

 

 

MAJOR EXAMS - 40%
Exams are worth 40% of the overall grade for the course. There will be 4 exams and a comprehensive final exam. You will be allowed to drop one exam grade. Each exam is worth 13.3% for a combined 40%, once the lowest exam is dropped. Four lecture exams plus (multiple choice, fill in the blank, and short answer). The exam material will come from the lecture outlines, textbook readings, web readings, lab manual, and other assignments. One exam grade will be dropped, this will NOT include the final exam. If you MISS the due date and time for an exam for any reason, a grade of zero will be assigned for that exam will be your drop for the semester. NO MAKE-UPS or extra time will be given for any reason on any EXAM.

 

FINAL EXAM - 10%:                                                                                                                                                                                   

The final exam is comprehensive and mandatory. It includes all the covered material during the semester. The final exam will be given in the classroom, not in the Testing Center. (Remember NO MAKE - UPS on exams).

 

QUIZZES/ ADDITIONAL ASSIGNMENTS 15%
There will be quizzes and/or additional assignments during the semester. The quizzes will be fill-in-the-blank, multiple choice, labeling, and/or short answer. IMPORTANT!! the quizzes are (usually) given at the beginning of the class. If you are late to class and the quiz has already begun you may participate in the quiz but you will have to finish with other students. However, arriving after the quiz is finished will prevent you from taking it and a grade of zero will be assigned for this quiz. MISSING the DUE DATE and/or TIME for any quiz or assignment, a grade of zero will be assigned for that quiz or assignment and that will be your drop for the semester.

 

CLASS PARTICIPATION - 5%                                                                                                                                                                           

Some activities will be done during the class time and they will be counted for class participation.

 

LAB NOTEBOOK - 25%                                                                                                                                                                               

Students are required to maintain a lab notebook to document all the covered labs/experiments. Notebooks will be collected periodically for grading. 

 

LAB FINAL PROJECT - 5%                                                                                                                                                                               

The lab final project's details will be provided by the instructor. The project is a summary for the lab techniques previously learned during the semester. It tests the students ability to collect a sample, store it, extract the DNA from it, amplify the DNA with PCR, and run a gel.

  

IMPORTANT NOTE: please remember the following:                                                                                                                                                           

**NO MAKE-UPS or extra time will be given for any reason on any quiz, assignment, or exam                                                                                         

**NO EXTRA-CREDIT will be given for any reason  

**NO CURVING on the grade                                                                                                                                                      

 

FINAL GRADE CHANGES: The final grade turned into the registrar office will not be changed unless approved by full time biology faculty committee. Request must be submitted in writing.

 

 

Testing Center:

Room 122

All lecture tests, excluding take-home exams and final exams, will be taken in the Testing Center during days scheduled by the teacher during normal Testing Center hours.  Tests will be taken outside of class lecture time.  Please note:  No test may be started less than 1.5 hour before the Science Testing Center closes. You must present an Amarillo College student ID every time you take a test. The Testing Center staff will retain your ID while you take your test and will return it to you when you turn in your test.  No appointments are necessary (However, I suggest you check for availability)

It is the student responsibility to check for the working hours of the Testing Center and the last test handout time. Regular hours of the Washington Street Campus Science Testing Center are: 

Mon: 9 am -10 pm (last test at 8:30 pm)

Tue: 9 am -10 pm (last test at 8:30 pm) 

Wed: 9 am-5:30 pm (last test at 4:00 pm)

Thur: 9 am -10 pm (last test at 8:30 pm)

Fri: 9 am -10 pm (last test at 8:30 pm)

Sat: 9am-7:30pm (last test at 6:00 pm)

Sun: closed.                                                                                                                                                                                                                                                                   

Mandatory Tutoring:                                                                                                                                                                                          In an effort to increase retention in Biology courses, any student who scores below a 70 on any exam (excluding the Final Exam week) must complete a mandatory 1 hour tutoring session before taking the next exam. Before getting mandatory tutoring, students must first make a tutoring session appointment. **NOTE (a new tutoring/testing center policy): students may NOT be allowed to take the tutoring and the test in the same day. 

Attendance

Regular attendance is necessary for satisfactory achievement.  It is therefore the responsibility of the student to attend class. Absences result in zeros for any missed quizzes, exams, presentations or participation grades. If you stop attending class and do not officially drop the course, you will receive an “F” for the course. A grade of “W” will be given for student-initiated drops or withdrawals. Texas law now mandates that students may only drop or withdraw 6 times in their entire college careers, excluding drops prior to the census date.  Before a student can drop a class, they must first meet with the instructor.

Students must Scan in at the beginning of class- All students must bring their student ID with them to     every class.  When students enter the class you must scan in.  Smart phones can also be used by downloading “Ellucian Go”, which will contain there virtual, ID.  When students miss (2) consecutive absences, a retention alert case will be generated and a text and email message will be sent to the student at 7 am the next morning.  Three total absences during the semester will result in another retention alert.  Student academic affairs are notified of all retention alerts

Calendar

Week

Date

Lecture

Lab

1

Jan 22

Syllabus

Syllabus

2

Jan 27

Lec 1: Introduction to Biotechnology

Lab 1: The Metric System

Jan 29

Lec 2: Introduction to Biology

Lab 1: Measurements

3

Feb 03

Lec 2: Introduction to Biology

Lab 2: Water Testing

Feb 05

Lec 3: Molecules of Life

Lab 2: Water Testing

4

Feb 10

Lec 3: Molecules of Life

Lab 3: Lab Math

Feb 12

Lec 4: Cell Components

Lab 3: Solutions Prep- serial dilution

5

Feb 17

Lec 4: Cell Components

Lab 4: The Effect of pH Change on Protein,

Feb 19

Lec 5: Cell Membrane

Major Exam 1: (Chapters 2, 3, 4) + (Labs 1, 2, 3, 4)

6

Feb 24

Lec 5: Cell Membrane

Lab 6: Diffusion

Feb 26

Lec 6: Metabolism

Lab 7: Making Media for Bacteria Cell Culture

7

Mar 02

Lec 7: Cellular Respiration

Lab 7: Sterile Technique and Pouring Plates

Mar 04

Lec 7: Cellular Respiration

Lab 8: Bacteria Cell Culture, staining of E. coli

8

Mar 09

Lec 8: Photosynthesis

Lab 9: Enzymes

Mar 11

Lec 9: DNA Structure

Major Exam 2: (Chapters 5, 6, 7, 8) + (Labs 6, 7, 8, 9)

9

Mar 16

 SPRING BREAK

 

 SPRING BREAK

Mar 18

10

Mar 23

WEEK OFF

WEEK OFF

Mar 25

11

Mar 30

Lec 10: DNA Transcription & Translation

Lab 10: Transgenic- Peglo gene insert into E.coli

Apr 01

Lec 10: DNA Transcription & Translation

Lab 11: DNA Extraction from Bacteria (E.coli), usage of Nanodrop

12

Apr 06

Lec 10: DNA Transcription & Translation

Lab 12: Making Agarose Gel

Apr 08

Lec 11: The Cell Cycle

Lab 12: Running the Peglo gene electrophoresis and interpreting results

12

13

Apr 06

Lec 11: The Cell Cycle

Lab 13: Mitosis- using the VR googles to look up video, prep of slides to examine mitosis

Apr 13

Apr 15

Lec 12: Meiosis

Major Exam 3: (Chapters 9, 10, 11) + (Labs 10, 11, 12, 13)

14

Apr 20

Lec 12: Meiosis

Lab 15: Mass spec- blood type determination

Apr 22

Lec 12: Meiosis

Lab 16: Real-Time PCR on Peglo gene

15

Apr 27

Lec 13: Genetics

Lab 16: Real-Time PCR on Peglo gene

  April 30th: the last day to withdraw

Lab 16: Real-Time PCR on Peglo gene

16

May 04

Lec 13: Genetics

Lab 17: Final Project

May 06

Lec 14: Chromosomal Basis of Inheritance

Lab 17: Final Project

17

May 11

Lec 14: Chromosomal Basis of Inheritance

Lab 17: Final Project

May 13

Major Exam 4: (Chapters 12, 13, 14) + (Labs 15, 16)

18

May 18

The Finals Week

May 20

*** The schedule is subject to change

Additional Information

EMAIL: To insure email delivery, please email your instructor from your student email (inside the course using the email link on the left side of the screen). The instructor will check email Monday - Thursday by 5:00 PM and Fridays by 1:00PM. Emails after 5:00PM will be checked the following day. The instructor will try to respond within 24 hours, except on Fridays and week ends. Remember instructors teach numerous other courses. Be patient.

Also remember Instructor's emails are sent to your default email address. The students are responsible for checking their emails regularly as the instructor may send some course notifications. 

 

CLASS WEBSITE: AC Online is utilized in this class as a grade book and e-mail system. There may be quizzes and other assignments to be completed through AC Online. I will post announcements, lecture and lab handouts, photos, and other important material via AC Online. The login for AC Online is the same as with WebAdvisor. If you do not have a computer or internet access at home, you have available to you the computer lab on campus in the library second floor.

Biology Study Center: Located in the Warren building, room 110.

MSDS: Material Safety Data Sheet may be requested from your instructor.

Campus Police: Campus Police NonEmergency 371-5163, in case of Emergency call 371-5911 or call 911 for city police and ambulance assistance.

Expectations: Every student will take personal responsibility for his/her learning in this course. To succeed, each student must...

Attend all lecture and lab meetings

Spend at least 1 hour of study for each hour spent in lecture and lab

Complete reading assignments before coming to class

Participate in lecture and lab by asking questions and being active in lab

Demonstrate college-level effort and behavior

Complete all assignments when due.

 

Any information in this syllabus can be modified at the discretion of the instructor.

Syllabus Created on:

01/18/20 8:53 PM

Last Edited on:

04/09/20 1:00 PM